dex2jar

root@kali:~# d2j-apk-sign -h
d2j-apk-sign -- Sign an android apk file use a test certificate.
usage: d2j-apk-sign [options] <apk>
options:
 -f,--force                   force overwrite
 -h,--help                    Print this help message
 -o,--output <out-apk-file>   output .apk file, default is $current_dir/[apk-nam
                              e]-signed.apk
 -t,--tiny                    use tiny sign
version: 2.1-SNAPSHOT

root@kali:~# d2j-asm-verify -h
d2j-asm-verify -- Verify .class in jar
usage: d2j-asm-verify [options] <jar0> [jar1 ... jarN]
options:
 -d,--detail   Print detail error message
 -h,--help     Print this help message
version: 2.1-SNAPSHOT

root@kali:~# d2j-baksmali -h
d2j-baksmali -- disassembles and/or dumps a dex file
usage: d2j-baksmali [options] <dex>
options:
 -b,--no-debug-info            [not impl] don't write out debug info (.local, .p
                               aram, .line, etc.)
 -f,--force                    force overwrite
 -h,--help                     Print this help message
 -l,--use-locals               output the .locals directive with the number of n
                               on-parameter registers, rather than the .register
 -o,--output <out>             output dir of .smali files, default is $current_d
                               ir/[jar-name]-out/
 -p,--no-parameter-registers   use the v<n> syntax instead of the p<n> syntax fo
                               r registers mapped to method parameters
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/Smali

root@kali:~# d2j-class-version-switch -h
Usage: clz-version-switch version old.jar new.jar

root@kali:~# d2j-decrypt-string -h
d2j-decrypt-string -- Decrypt in class file
usage: d2j-decrypt-string [options] <jar>
options:
 -cp,--classpath <cp>                 add extra lib to classpath
 -d,--delete                          delete the method which can decrypt the st
                                      ings
 -da,--deep-analyze                   use dex2jar IR to static analyze and find 
                                      more values like byte[]
 -f,--force                           force overwrite
 -h,--help                            Print this help message
 -m,--methods <cfg>                   a file contain a list of methods, each lin
                                      e like: La/b;->decrypt(III)Ljava/lang/Stri
                                      ng;
 -mn,--decrypt-method-name <name>     the owner of the method which can decrypt 
                                      the stings, the method's signature must be
                                       static (parameter-type)Ljava/lang/String;
                                      . Please use -pt,--parameter-type to set t
                                      he argument descrypt.
 -mo,--decrypt-method-owner <owner>   the owner of the method which can decrypt 
                                      the stings, example: java.lang.String
 -o,--output <out>                    output of .jar files, default is $current_
                                      dir/[jar-name]-decrypted.jar
 -pd,--parameters-descriptor <type>   the descriptor for the method which can de
                                      crypt the stings, example1: Ljava/lang/Str
                                      ing; example2: III, default is Ljava/lang/
                                      String;
 -t,--arg-types <type>                comma-separated list of types:boolean,byte
                                      ,short,char,int,long,float,double,string. 
                                      Default is string
 -v,--verbose                         show more on output
version: 2.1-SNAPSHOT
online help: 
https://sourceforge.net/p/dex2jar/wiki/DecryptStrings
https://bitbucket.org/pxb1988/dex2jar/wiki/DecryptStrings

root@kali:~# d2j-dex-recompute-checksum -h
d2j-dex-recompute-checksum -- recompute crc and sha1 of dex.
usage: d2j-dex-recompute-checksum [options] dex
options:
 -f,--force                   force overwrite
 -h,--help                    Print this help message
 -o,--output <out-dex-file>   output .dex file, default is [dex-name]-rechecksum
                              .dex
version: 2.1-SNAPSHOT

root@kali:~# d2j-dex-weaver -h
d2j-dex-weaver -- replace invoke in dex
usage: d2j-dex-weaver [options] dex
options:
 -c,--config <config>         config file
 -h,--help                    Print this help message
 -o,--output <out-dex-file>   output .dex file
 -s,--stub-dex <stub>         stub dex
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/DexWeaver

root@kali:~# d2j-dex2jar -h
d2j-dex2jar -- convert dex to jar
usage: d2j-dex2jar [options] <file0> [file1 ... fileN]
options:
 --skip-exceptions            skip-exceptions
 -d,--debug-info              translate debug info
 -e,--exception-file <file>   detail exception file, default is $current_dir/[fi
                              le-name]-error.zip
 -f,--force                   force overwrite
 -h,--help                    Print this help message
 -n,--not-handle-exception    not handle any exceptions thrown by dex2jar
 -nc,--no-code
 -o,--output <out-jar-file>   output .jar file, default is $current_dir/[file-na
                              me]-dex2jar.jar
 -os,--optmize-synchronized   optimize-synchronized
 -p,--print-ir                print ir to System.out
 -r,--reuse-reg               reuse register while generate java .class file
 -s                           same with --topological-sort/-ts
 -ts,--topological-sort       sort block by topological, that will generate more
                               readable code, default enabled
version: reader-2.1-SNAPSHOT, translator-2.1-SNAPSHOT, ir-2.1-SNAPSHOT

root@kali:~# d2j-dex2smali -h
d2j-baksmali -- disassembles and/or dumps a dex file
usage: d2j-baksmali [options] <dex>
options:
 -b,--no-debug-info            [not impl] don't write out debug info (.local, .p
                               aram, .line, etc.)
 -f,--force                    force overwrite
 -h,--help                     Print this help message
 -l,--use-locals               output the .locals directive with the number of n
                               on-parameter registers, rather than the .register
 -o,--output <out>             output dir of .smali files, default is $current_d
                               ir/[jar-name]-out/
 -p,--no-parameter-registers   use the v<n> syntax instead of the p<n> syntax fo
                               r registers mapped to method parameters
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/Smali

root@kali:~# d2j-jar-access -h
d2j-jar-access -- add or remove class/method/field access in jar file
usage: d2j-jar-access [options] <jar>
options:
 -ac,--add-class-access <ACC>       add access from class
 -af,--add-field-access <ACC>       add access from field
 -am,--add-method-access <ACC>      add access from method
 -f,--force                         force overwrite
 -h,--help                          Print this help message
 -o,--output <out-dir>              output dir of .j files, default is $current_
                                    dir/[jar-name]-access.jar
 -rc,--remove-class-access <ACC>    remove access from class
 -rd,--remove-debug                 remove debug info
 -rf,--remove-field-access <ACC>    remove access from field
 -rm,--remove-method-access <ACC>   remove access from method
version: 2.1-SNAPSHOT

root@kali:~# d2j-jar-weaver -h
d2j-jar-weaver -- replace invoke in jar
usage: d2j-jar-weaver [options] jar
options:
 -c,--config <config>         config file
 -h,--help                    Print this help message
 -o,--output <out-jar-file>   output .jar file
 -s,--stub-jar <stub>         stub jar
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/JarWeaver

root@kali:~# d2j-jar2dex -h
d2j-jar2dex -- Convert jar to dex by invoking dx.
usage: d2j-jar2dex [options] <dir>
options:
 -f,--force                   force overwrite
 -h,--help                    Print this help message
 -o,--output <out-dex-file>   output .dex file, default is $current_dir/[jar-nam
                              e]-jar2dex.dex
version: 2.1-SNAPSHOT

root@kali:~# d2j-jar2jasmin -h
d2j-jar2jasmin -- Disassemble .class in jar file to jasmin file
usage: d2j-jar2jasmin [options] <jar>
options:
 -d,--debug              disassemble debug info
 -e,--encoding <enc>     encoding for .j files, default is UTF-8
 -f,--force              force overwrite
 -h,--help               Print this help message
 -o,--output <out-dir>   output dir of .j files, default is $current_dir/[jar-na
                         me]-jar2jasmin/
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/Jasmin

root@kali:~# d2j-jasmin2jar -h
d2j-jasmin2jar -- Assemble .j files to .class file
usage: d2j-jasmin2jar [options] <jar>
options:
 --no-compute-max
 -cv,--class-version <arg>       default .class version, [1~9], default 6 for JA
                                 VA6
 -d,--dump                       dump to stdout
 -e,--encoding <enc>             encoding for .j files, default is UTF-8
 -f,--force                      force overwrite
 -g,--autogenerate-linenumbers   autogenerate-linenumbers
 -h,--help                       Print this help message
 -o,--output <out-jar-file>      output .jar file, default is $current_dir/[jar-
                                 name]-jasmin2jar.jar
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/Jasmin

root@kali:~# d2j-smali -h
d2j-smali -- assembles a set of smali files into a dex file
usage: d2j-smali [options] [--] [<smali-file>|folder]*
options:
 --                             read smali from stdin
 -a,--api-level <API_LEVEL>     [not impl] The numeric api-level of the file to 
                                generate, e.g. 14 for ICS. If not specified, it 
                                defaults to 14 (ICS).
 -h,--help                      Print this help message
 -o,--output <FILE>             the name of the dex file that will be written. T
                                he default is out.dex
 -v,--version                   prints the version then exits
 -x,--allow-odex-instructions   [not impl] allow odex instructions to be compile
                                d into the dex file. Only a few instructions are
                                 supported - the ones that can exist in a dead c
                                ode path and not cause dalvik to reject the clas
                                s
version: 2.1-SNAPSHOT
online help: https://sourceforge.net/p/dex2jar/wiki/Smali

root@kali:~# d2j-std-apk -h
d2j-std-zip -- clean up apk to standard zip
usage: d2j-std-zip [options] <zip>
options:
 -h,--help           Print this help message
 -o,--output <out>   The output file
version: 2.1-SNAPSHOT

root@kali:~# d2j_invoke --help
Usage: java [options] <mainclass> [args...]
           (to execute a class)
   or  java [options] -jar <jarfile>.jar [args...]
           (to execute a jar file)
   or  java [options] -m <module>[/<mainclass>] [args...]
       java [options] --module <module>[/<mainclass>] [args...]
           (to execute the main class in a module)
   or  java [options] <sourcefile>.java [args]
           (to execute a source-file program)

 Arguments following the main class, source file, -jar <jarfile>.jar,
 -m or --module <module>/<mainclass> are passed as the arguments to
 main class.

 where options include:

    -zero	  to select the "zero" VM
    -dcevm	  to select the "dcevm" VM
    -cp <class search path of directories and zip/jar files>
    -classpath <class search path of directories and zip/jar files>
    --class-path <class search path of directories and zip/jar files>
                  A ":"-separated list of directories, JAR archives,
                  and ZIP archives to search for class files.
    -p <module path>
    --module-path <module path>...
                  A ":"-separated list of elements, each element is a file path
                  to a module or a directory containing modules. Each module is either
                  a modular JAR or an exploded-module directory.
    --upgrade-module-path <module path>...
                  A ":"-separated list of elements, each element is a file path
                  to a module or a directory containing modules to replace
                  upgradeable modules in the runtime image. Each module is either
                  a modular JAR or an exploded-module directory.
    --add-modules <module name>[,<module name>...]
                  root modules to resolve in addition to the initial module.
                  <module name> can also be ALL-DEFAULT, ALL-SYSTEM,
                  ALL-MODULE-PATH.
    --enable-native-access <module name>[,<module name>...]
                  allow code in modules to access code and data outside the Java runtime.
                  <module name> can also be ALL-UNNAMED to indicate code on the class path.
    --illegal-native-access=<value>
                  allow or deny access to code and data outside the Java runtime
                  by code in modules for which native access is not explicitly enabled.
                  <value> is one of "deny", "warn" or "allow". The default value is "warn".
                  This option will be removed in a future release.
    --list-modules
                  list observable modules and exit
    -d <module name>
    --describe-module <module name>
                  describe a module and exit
    --dry-run     create VM and load main class but do not execute main method.
                  The --dry-run option may be useful for validating the
                  command-line options such as the module system configuration.
    --validate-modules
                  validate all modules and exit
                  The --validate-modules option may be useful for finding
                  conflicts and other errors with modules on the module path.
    -D<name>=<value>
                  set a system property
    -verbose:[class|module|gc|jni]
                  enable verbose output for the given subsystem
    -version      print product version to the error stream and exit
    --version     print product version to the output stream and exit
    -showversion  print product version to the error stream and continue
    --show-version
                  print product version to the output stream and continue
    --show-module-resolution
                  show module resolution output during startup
    -? -h -help
                  print this help message to the error stream
    --help        print this help message to the output stream
    -X            print help on extra options to the error stream
    --help-extra  print help on extra options to the output stream
    -ea[:<packagename>...|:<classname>]
    -enableassertions[:<packagename>...|:<classname>]
                  enable assertions with specified granularity
    -da[:<packagename>...|:<classname>]
    -disableassertions[:<packagename>...|:<classname>]
                  disable assertions with specified granularity
    -esa | -enablesystemassertions
                  enable system assertions
    -dsa | -disablesystemassertions
                  disable system assertions
    -agentlib:<libname>[=<options>]
                  load native agent library <libname>, e.g. -agentlib:jdwp
                  see also -agentlib:jdwp=help
    -agentpath:<pathname>[=<options>]
                  load native agent library by full pathname
    -javaagent:<jarpath>[=<options>]
                  load Java programming language agent, see java.lang.instrument
    -splash:<imagepath>
                  show splash screen with specified image
                  HiDPI scaled images are automatically supported and used
                  if available. The unscaled image filename, e.g. image.ext,
                  should always be passed as the argument to the -splash option.
                  The most appropriate scaled image provided will be picked up
                  automatically.
                  See the SplashScreen API documentation for more information
    @argument files
                  one or more argument files containing options
    --disable-@files
                  prevent further argument file expansion
    --enable-preview
                  allow classes to depend on preview features of this release
To specify an argument for a long option, you can use --<name>=<value> or
--<name> <value>.